M. Sc. Thesis Abstracts

Aleixo Muise, M.Sc. Chemistry 1993

Reversible phosphorylation of fructose 1,6-bisphosphatase mediates enzyme role in glycerol metabolism in the freeze-avoiding gall moth Epiblema scudderiana

 

Abstract:

Fructose-1,6-bisphosphatse (FBPase) from larvae of the freeze-avoiding gall moth Epiblema scudderiana occurs in two forms which are interconverted by reversible phosphorylation and separable by CM-cellulose column chromatography. The phosphoenzyme has properties that would make it the more active form in vivo. Compared with the dephosphorylated form, the phosphoenzyme had 3-fold lower values for Km fructose-1,6-bisphosphate and Ka Mg2+ and lower sensitivities to allosteric inhibitors (I50 values for fructose-2,6-bisphosphate and AMP were 50 % and 10-fold higher, respectively). The proportions of the two enzyme forms in the larvae changed with the seasons and with acclimation to warm (15°C) versus cold (4°C) temperatures. The phosphorylated enzyme predominated (70% of total activity) in early autumn and during the spring, as well as in warm acclimated larvae, all situations where gluconeogenesis via FBPase would be favoured. During the autumn cold-hardening period when the larvae are actively synthesizing the antifreeze, glycerol, the ratio of the two enzyme forms changed to about 50:50. This, plus allosteric inhibition and low temperature effects on enzyme kinetics, would effectively suppress FBPase activity and prevent futile recycling of glycerol carbon back into glycogen during the winter months when the 2 M pool of polyol must be sustained for antifreeze protection. Acclimation studies suggested that low temperature itself might be the signal that triggers enzyme dephosphorylation and this could integrate control over FBPase with the well known phosphorylation-mediated activation of glycogen phosphorylase by low temperature in cold-hardy insects.

Peggy L. Schade, M.Sc. Chemistry, 1996

Glycogen degradation by alpha-glucosidase from a hibernating ground squirrel, Spermophilus lateralis, and a freeze tolerant frog, Rana sylvatica

 

Abstract:

Glycogen degradation in cells can proceed via two routes, the well-known phosphorolytic pathway via glycogen phosphorylase (GP) and the glucosidic pathway involving alpha-glucosidase. The present study analyzes alpha-glucosidase and its potential for net contributions to organ glucose production in two species that exhibit unusual glucose requirements while overwintering at low body temperatures: the hibernating golden-mantled ground squirrel, Spermophilus lateralis, and the freeze-tolerant wood frog, Rana sylvatica. Mammalian liver (ground squirrel, rat) possessed two neutral isozymes of alpha-glucosidase and one acidic form (pH optima 7.0 and 4.0) whereas amphibian liver (wood frog, leopard frog) had one neutral and one acidic enzyme. Tissue distribution of acidic and neutral forms revealed highest activities in liver and kidney and significant changes in activity during hibernation or freezing in selected tissues. Compared with the amount of active GP, acid alpha-glucosidase could make a substantial contribution to net glucose production in several wood frog organs, notably heart. Liver isozymes were separated by isoelectrofocusing prior to characterization of substrate specificity and affinity, inhibitor effects, and thermal denaturation. Neutral isozymes of all species were similar showing limited use of glycogen, strong thermal denaturation at 45°C and above, and generally reduced substrate affinity at the low temperatures characteristic of the hibernating state. Acidic isozymes used glycogen, showed good thermal stability and substrate affinities were largely temperature-independent. Inhibition of acidic alpha-glucosidase by salts and carbohydrates was reduced for the wood frog enzyme, compared with the leopard frog, a factor that may improve enzyme function in the frozen state.

 

Thomas D. Pfister, M.Sc. Chemistry 1999

Phosphorylation regulation in two species of cold-hardy goldenrod gall insects.

 

Abstract:

The larvae of two cold-hardy insects, the freeze avoiding gall moth Epiblema scudderiana and freeze tolerant gall fly Eurosta solidaginis, endure prolonged exposures to subzero temperatures while overwintering. Both rely on a reduction in metabolic rate and the production of polyols for survival. The present study analyzed the role of several signal transduction enzymes in cold hardiness. Changes in cAMP-dependent protein kinase (PKA), protein phosphatases-1 (PP1), 2A, 2C and protein tyrosine phosphatase activities were monitored over the course of the winter season and also in insects exposed to -4C, -20C or anoxic conditions. The catalytic subunit of PKA (PKAc) and PP1 were purified to homogeneity from both species. Effects of low temperature on the enzymes included increased affinity of PKAc for the Kemptide substrate, and increased inhibition by okadaic acid of PP1. Differential regulation of kinases and phosphatases by low temperature appears to be key to regulating polyol production and, hence, cold survival.

 

Estatira Sepehr, M.Sc. Chemistry 2002

Effect of fermentation of folate bioavailability.

 

Abstract:

The objective of this study was to assess the association between dietary fibre (DF) and fermentable substrates (FS) intake, colonic bacterial fermentation, and folate bioavailability. Folate is important in human nutrition because folate deficiencies are associated with neural tube defects and anaemia and excess folate intake may mask other disease states. Folate may also modulate hyperhomocysteynemia, an independent risk factor for cardiovascular disease. Current recommended intakes (400 ug/d) are based solely on folacin intake but it has been suggested that folacin may also be obtained indirectly from colonic bacteria, stimulated by fermentation of DF and FS. In order to study this possibility, male weanling Sprague Dawley rats were folate depleted by feeding a low folacin AIN93G formulated basal diet for 28 d and then fed diets differing in DF or FS and folate (0.25-1.0 mg/kg diet) to replete liver stories. During the repletion phase, the increase in liver folate was proportional only to the dietary folate content and did not vary with changing dietary DF or FS. An antibiotic (succinylsulfathiazole) was added to inhibit gut bacterial populations and bacterial fermentation. Addition of the antibiotic lowered total liver folate in controls and test diets equally suggesting an effect of succinylsulfathiazole on folate absorption or metabolism. Changes in cecal volatile fatty acids, increases in fecal diaminopimelic acid excretion, DF or FS balance as well as increases in fecal folate content provided evidence for an increased bacterial fermentation, an increased bacterial excretion, and an increased production of folate in the colon. However, colonic folate produced by bacterial fermentation was not bioavailable.

Zhouli (Julie) Ni, M.Sc. Biology 2004

Antioxidant defense in the hibernating thirteen-lined ground squirrel, Spermophilus tridecemlineatus.

 

Abstract:

Dramatic changes in blood flow and oxygen consumption during torpor-arousal cycles could increase the risk of oxidative stress to tissues of mammalian hibernators. Changes to antioxidant defense systems during hibernation were assessed in thirteen-lined ground squirrels, Spermophilus tridecemlineatus, focusing on heme oxygenase 1 (HO1), superoxide dismutase (SOD) and the thioredoxin (Trx) system. Compared with euthermic control squirrels, inducible HO1 was elevated at both the transcriptional and translational level in multiple tissues of hibernating squirrels. The Nrf2/ARE signal transduction pathway commonly regulates HO1 and protein levels of both the transcription factor Nrf2 and its cofactor MafG were elevated in concert with HO1 implicating this pathway in HO1 expression in hibernation. Both cytosolic Cu/Zn SOD and mitochondrial Mn SOD increased significantly in squirrel muscle during hibernation, probably contributing to antioxidant defense during arousal from torpor when oxygen consumption by muscle increases rapidly to support shivering thermogenesis. Proteins of the thioredoxin system (Trx1, Trx2, TrxR2) also rose in multiple tissues during hibernation, perhaps to remedy a glutathione redox imbalance during hibernation. Amino acid sequencing of HO1 and SOD showed strong conservation of sequence compared with nonhibernating mammals but selected substitutions were found that could aid enzyme function at low body temperatures. The data support the idea that hibernators experience oxidative stress over torpor-arousal cycles and in response activate antioxidant defenses to minimize damage. A better understanding of antioxidant defense systems in hibernation may guide the use of antioxidants in medical treatments for ischemia/reperfusion damage and technology for cold preservation of organs.

Ashley K. Woods, M.Sc. Biology, 2005

Regulation of protein and phospholipid metabolism in the 13-lined ground squirrel, Spermophilus tridecemlineatus and the wood frog, Rana sylvatica.

 

Abstract:

Mammalian hibernation and ectotherm freeze tolerance are unique forms hypometabolism employed for animal winter survival. The present studies explore selected molecular mechanisms associated with hypometabolism in two model animals, the thirteen-lined ground squirrel, Spermophilus tridecemlineatus, and the wood frog, Rana sylvatica. Conservation of fuel reserves and of macromolecular integrity during hypometabolism depend on the coordinated suppression of pathways of macromolecular synthesis and degradation. Investigations of the regulation of protein degradation, protein synthesis, andphospholipid degradation pathways were undertaken comparing control and stressed conditions in skeletal muscle and liver from both animals. Several eukaryotic initiation factors were analyzed using western blotting and revealed animal specific changes in the regulation of protein synthesis. The activity of the proteasome, responsible for protein degradation, was assayed fluorometrically and was correlated with measurements of oxidatively damaged proteins (protein carbonyls) and immunoblot analysis of levels of ubiquitin-tagged damaged proteins. Proteasome activity was strongly suppressed in frozen wood frogs via changes in both the total amount and the phosphorylation state of the proteasome. However, proteasome activity remained constant in the hibernator model. Ubiquitination increased in the hibernator model, but decreased in the frog system highlighting a difference in the ubiquitin system upstream of the proteasome. Assays of the activity of cytoplasmic phospholipase A2 (cPLA2) provided estimates of the role ofarachidonic acid signaling in hibernation and freezing survival. Phospholipase activity decreased significantly during hibernation, but was enhanced during freezing. Control of the proteasome and cPLA2 have implications for the repair mechanisms that deal with oxidative damage to cellular macromolecules.

Guijun (Jeremy) Zhang, M.Sc. Chemistry, 2006

Protein chaperones and winter cold hardiness in insects: heat shock proteins and glucose regulated proteins in freeze-tolerant and freeze-avoiding species.

 

Abstract:

Two species of insects with different overwintering strategies were chosen as model organisms to assess the role of chaperone proteins in insect cold hardiness. Epiblema scudderiana, a freeze-avoiding gall moth, and Eurosta solidaginis, a freeze-tolerant gall fly, were used to compare and contrast the two overwintering strategies; both species overwinter in the diapause stage as last instar larvae inside galls on the stems of goldenrod plants. The research reported in this thesis analyzed changes in molecular chaperone levels over the winter season in insects sampled from outdoors as well as in larvae given laboratory exposures to subzero temperatures and hypoxia. Multiple proteins in the heat shock (Hsp10, Hsp40, Hsp60, Hsp70, Hsp110) and glucose-regulated (Grp75, Grp78, Grp94, Grp170) families of chaperones were assessed as well as other chaperones (TCP-1, αA- and αB-crystallins). The heat shock transcription factor (HSF-1) was also analyzed. Despite an overall suppression of transcription and translation during winter diapause, selected chaperone proteins were differentially expressed in the larvae in response to low temperatures, freeze/thaw, or hypoxia exposures. Most of the chaperones were up-regulated directly or indirectly by subzero temperature and/or anoxia exposures to enhance their actions in the stabilization, repair or elimination of misfolded or denatured proteins. These chaperones function incytoplasmic, endoplasmic reticulum and mitochondrial compartments, indicating that multiple endogenous pathways are engaged in maintaining and/or restoring cellular homeostasis in the larvae in response to these insults. Elevated HSF-1 levels indicated that Hsp enhancement in the larvae was due to up-regulation of the genes involved.

 

Lin Hui Yao, M.Sc. Chemistry, 2007

Profile of FoxO proteins and MnSOD in two cold-hardy insect species exposed to low temperature.

 

Abstract:

Expression of FoxO genes and proteins in two insects with different overwintering strategies were studied with Western blotting and RT-PCR. Epiblema scudderiana, a freeze-avoiding gall moth, and Eurosta solidaginis, a freeze-tolerant gall fly were used as model organisms to assess the role of FoxO transcription factors and one of their downstream proteins, manganese superoxide dismutase (MnSOD) in insect cold hardiness. FoxO3a gene and protein levels, as well as MnSOD protein, were analyzed inEpiblema scudderiana over time courses of exposure to 5°C or ‑15°C. Significant changes in total Foxo3a protein, the amount of phosphorylated inactive FoxO3a, FoxO3a mRNA levels, and MnSOD content were identified under different conditions. For example, reduced phospho-FoxO3a (Ser 253) content in larvae exposed to -15°C suggested enhanced transcriptional activation of genes under FoxO3a control at subzero temperatures whereas MnSOD content increased in larvae exposed to 5°C. Sequencing of FoxO3a mRNA from Epiblema scudderiana showed that the transcription factor was highly conserved as compared with mammals. FoxO3a, FoxO1 and MnSOD protein levels were also measured in the freeze tolerant insect Eurosta solidaginis subjected to 5 and ‑15°C exposures as well as a time course of thawing after freezing at -15°C for 1 week. The results implied that FoxO3a and FoxO1 functioned oppositely during cold, freezing and thawing of the larvae. Expression of MnSOD increased with 5°C exposure, remained elevated when larvae were frozen at -15°C, and decreased after thawing. Differential expression of FoxOs and MnSOD in both species suggest that MnSOD may not be transcriptionallycontrolled by FoxO3a or FoxO1 in cold hardy insects.

 

Melanie Bouffard, M.Sc. Chemistry, 2007

Involvement of FOXO transcription factors and glycogen synthase kinase 3 in the freeze tolerance capability of the wood frog, Rana sylvatica.  

 

Abstract: 

Animals cope with the subzero temperatures of winter in different ways. The wood frog, Rana sylvatica, endures whole body freezing and is able to survive weeks completely frozen. Organisms that endure extreme environmental stress on a periodic or seasonal basis have developed ways to strongly suppress their metabolic rate and enter a hypometabolic state to survive. Forkhead box ‘other’ (FOXO) transcription factors have important roles in various cellular processes such as metabolism, cellular proliferation, stress tolerance and lifespan. Immunoblotting was used to assess total and phosphorylated amounts of FOXO proteins in wood frog organs. Active FOXO1 increased in brain during freezing and thawing, possibly due to a need for gluconeogenesis during this stress. The levels of active FOXO3 increased in frog brain, kidney and liver during freezing and thawing and also during anoxia and aerobic recovery after anoxia, which could be due to the need to maintain or enhance antioxidant defenses under these stresses. Glycogen synthase kinase-3 (GSK3) is a protein kinase known to inhibit glycogen synthesis, cell growth and differentiation and protein translation. The amount of active GSK3 increased in the frozen state in brain, heart, kidney, liver and muscle of wood frogs. Furthermore, kinetic analysis of GSK3 showed that the skeletal muscle of frozen frogs appears to have a higher affinity for its substrate when compared to control GSK3. Allosteric effectors of GSK3 were also identified: glucose-6-phosphate activated the enzyme whereas AMP inhibited. The data expand our understanding of metabolic regulation during natural freeze tolerance.

Mani Mathialagan, MSc Biology 2008

Transcription factor regulation in mammalian hibernation: the thirteen-lined ground squirrel as a model.

   

Abstract:

The thirteen-lined ground squirrel (Spermophilus tridecemlineatus) is one of a number of mammalian species that hibernate over the winter months. Hibernation is characterized by long periods of deep torpor that are interspersed with periodic arousals. This thesis investigated three transcription factor pathways and their regulation and roles in hibernation using tools including immunoblotting of protein and phospho-protein levels, analysis of nuclear versus cytoplasmic distribution, binding to DNA, PCR to quantify mRNA transcripts, and gene sequencing. The carbohydrate response element-binding protein (ChREBP) regulates genes that are responsible for converting excess dietary carbohydrate (glucose) into triglycerides. During torpor ChREBP protein was decreased in kidney and liver and transcripts of two downstream genes (Fasn, PK-L) were differentially expressed; this was consistent with carbohydrate sparing during torpor. Growth and differentiation processes are also minimized during hibernation and ETS transcription factors are important regulators of these. Although levels of ETS increased in most organs of hibernators, ETS binding activity to DNA was greatly reduced indicating a growth suppressive function during torpor. Upstream effectors of ETS (epidermal growth factor receptor, protein kinases C and D) were also evaluated. To assess transcriptional state during hibernation, the Rb-E2F pathway was investigated. Retinoblastoma protein (Rb) associates with E2F1 and then recruits co-factors to the promoter region of target genes to suppress transcription. Rb and E2F1 proteins were elevated during hibernation and the co-factors HDAC and SUV39H1 showed parallel increases in the organs tested; oppositely, transcription of downstream genes (cMyc, Bcl2) was suppressed. These data confirm a reduced transcriptional state during torpor.